The detailed information of tRNA gene sequence


Sequence ID>WENV170162482
Genome IDCEOM01035004
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2489
End posion on genome 2563
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
agtcttattt
tRNA gene sequence 
GGGCGTGTAGTTCAGTGGTAGAACGCTTCGTTGACATCGAAGAGGCCATAAGTTCAATTC
TTATCACGCCCACCA
Downstream region at tRNA end position 
accctttaat
Secondary structure (Cloverleaf model)
>WENV170162482	Val	GAC
                   t      ACCA accctttaat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T T
                    T     T A T T C     A
        G A        A      | | | | |     A
      T     C T T G       A T A A G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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