The detailed information of tRNA gene sequence


Sequence ID>WENV170162529
Genome IDCEOM01037513
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1333
End posion on genome 1409
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attcaatttg
tRNA gene sequence 
GGTCCTATAGCTCAGTTGGTTAGAGTAGCTGACTCATAATCAGTTGGTCCCTGGTTCGAG
TCCAGGTGGGACCACCC
Downstream region at tRNA end position 
aagggaagcc
Secondary structure (Cloverleaf model)
>WENV170162529	Met	CAT
                   g      ACCC aagggaagcc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     TGGTC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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