The detailed information of tRNA gene sequence


Sequence ID>WENV170162549
Genome IDCEOM01038704
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 9259
End posion on genome 9185
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaaatagac
tRNA gene sequence 
GCCAATGTAGCTCAGTGGTAGAGCAGAGGACTCATAAGCCTTTGGTCGGCAGTTCAAATC
TGCCCATTGGCACCA
Downstream region at tRNA end position 
ttcgtgaatt
Secondary structure (Cloverleaf model)
>WENV170162549	Met	CAT
                   c      ACCA ttcgtgaatt
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     T - A
                     G - C          T A
                    T     C C G T C     A
        G A        A      | | | | |     A
      T     C T C G       G G C A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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