The detailed information of tRNA gene sequence


Sequence ID>WENV170162857
Genome IDCEOM01069947
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1538
End posion on genome 1613
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatttgtttt
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGTAGAGTACCGGTCTCCAAAACCGGGGGTTGTGGGTTCGAGA
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
agtttaactt
Secondary structure (Cloverleaf model)
>WENV170162857	Trp	CCA
                   t      GCCA agtttaactt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          A G
                    T     C T C C C     A
      T A A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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