The detailed information of tRNA gene sequence


Sequence ID>WENV170162947
Genome IDCEOM01079575
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 202
End posion on genome 132
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tataccttgt
tRNA gene sequence 
GGCGGGATGGCAGAGTGGTAATGCAGCGGCCTGCAAAGCCGTCAACGTCGGTTCAATTCC
GGCTCCCGCCTttt
Downstream region at tRNA end position 
tgtattaagt
Secondary structure (Cloverleaf model)
>WENV170162947	Cys	GCA
                   t      Tttt tgtattaagt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T T
                    T     C G G C C     A
        G A        G      | + | | |     A
      T     G A C G       G T C G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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