The detailed information of tRNA gene sequence


Sequence ID>WENV170163185
Genome IDCEOM01105132
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1
End posion on genome 86
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGGGTACGCCGGAGTTGGAGAGCCGGGGCAGACTGTAAATCTGTTGTCTATGACTGAAT
AGGTTCGAATCCTATTACCCCCACTA
Downstream region at tRNA end position 
cactacactc
Secondary structure (Cloverleaf model)
>WENV170163185	Tyr	GTA
                   n      ACTA cactacactc
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    C     T A T C C     A
    T T G A        G      | | | | |     G
  G         G G C C       A T A G G     C
  G         | | | |                 T T
  A         C C G G
    G A G          G     TGTCTATGACTGA
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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