The detailed information of tRNA gene sequence


Sequence ID>WENV170163905
Genome IDCEOM01185971
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 430
End posion on genome 341
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acttattcta
tRNA gene sequence 
GGAGGGATCGTATAGTCCGGTCTAGTGCGCGACACTCGAAATGTCGTGAGTCTTTATAGG
CTCCGTGGGTTCGAATCCCACTCCCTCCGCtt
Downstream region at tRNA end position 
taaacttcag
Secondary structure (Cloverleaf model)
>WENV170163905	Ser	CGA
                   a      GCtt taaacttcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  C         T A T G       G T G G G     C
  G         + | + |                 T T
  G         G T G C
    T C T A        G     TGAGTCTTTATAGGCTCC
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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