The detailed information of tRNA gene sequence


Sequence ID>WENV170164549
Genome IDCEOM01376282
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1291
End posion on genome 1215
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caatacgcat
tRNA gene sequence 
TCCAGCTTGGCGCAGTGTGGTAGCGTGTCAGACTCATAATCTGAAGGTCACCAGTTCGAA
TCTGGTAGCTGGTACTA
Downstream region at tRNA end position 
ttagctgttg
Secondary structure (Cloverleaf model)
>WENV170164549	Met	CAT
                   t      ACTA ttagctgttg
                     T   T
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     T G G T C     A
      T G A        G      | | | | |     G
    G       C G C G       A C C A G     C
    T       | | | +                 T T
    G       G C G T
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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