The detailed information of tRNA gene sequence


Sequence ID>WENV170164555
Genome IDCEOM01378424
Search identical group
Phylum/Class[CEOM] marine metagenome genome assembly TARA_004_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1615
End posion on genome 1710
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtgataaaat
tRNA gene sequence 
GGAAGAGGAACGGACCCCGGTGGGACGCCTGGACTTCAAATCTAGCGAGGGGCGTACAAC
GTCTCTGGTGGGTTCGACTCCCACACTCTTCCGCCA
Downstream region at tRNA end position 
ctttatatga
Secondary structure (Cloverleaf model)
>WENV170164555	SeC	TCA
                   t      GCCA ctttatatga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     G   A          T C
                    A     C A C C C     A
      C C C        A      | | | | |     G
    C       A G G C       G T G G G     C
    G           | |                 T T
    G       G A C G
      T G G        C     CGAGGGGCGTACAACGTCTCTG
                    C - G
                    T - A
                    G + T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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