The detailed information of tRNA gene sequence


Sequence ID>WENV170165014
Genome IDCEON01056122
Search identical group
Phylum/Class[CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5294
End posion on genome 5219
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaacatgat
tRNA gene sequence 
GGGAGTGTAGCTCAACGGTTAGAGCAGGGGACTCATAATCCCTTGGTTGCGGGTTCGAAT
CCCGCCGCTCCCACCA
Downstream region at tRNA end position 
aagcccaggt
Secondary structure (Cloverleaf model)
>WENV170165014	Met	CAT
                   t      ACCA aagcccaggt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C G C C C     A
      C A A        A      | | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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