The detailed information of tRNA gene sequence


Sequence ID>WENV170166254
Genome IDCEOO01045863
Search identical group
Phylum/Class[CEOO] marine metagenome genome assembly TARA_036_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1184
End posion on genome 1257
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaattttac
tRNA gene sequence 
GGGCACTTGGCGCAGCGGTTAGCGCAGGGGACTCATAATCCTTTGGTCCTAGGTTCAAAT
CCTAGAGTGCCCACtt
Downstream region at tRNA end position 
atcttaattt
Secondary structure (Cloverleaf model)
>WENV170166254	Met	CAT
                   c      ACtt atcttaattt
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     T - A          T A
                    T     G A T C C     A
      C G A        G      | | | | |     A
    G       C G C G       C T A G G     C
    G       | | | |                 T T
    T       G C G C
      T A          A     TGGTC
                    G + T
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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