The detailed information of tRNA gene sequence


Sequence ID>WENV170169094
Genome IDCEOP01158890
Search identical group
Phylum/Class[CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 236
End posion on genome 162
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatagtttaa
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCGGGGTTCAAG
TCCCTGAGGGCCCACac
Downstream region at tRNA end position 
caataccctt
Secondary structure (Cloverleaf model)
>WENV170169094	Met	CAT
                   a      ACac caataccctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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