The detailed information of tRNA gene sequence


Sequence ID>WENV170170351
Genome IDCEOP01456019
Search identical group
Phylum/Class[CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2709
End posion on genome 2633
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTTGTCGAAAGTTCGAG
TCTTTCCAGGCCCACCA
Downstream region at tRNA end position 
ttgtgttcac
Secondary structure (Cloverleaf model)
>WENV170170351	Met	CAT
                   t      ACCA ttgtgttcac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T T T C     A
      T G A        A      | | | | |     G
    T       C T C G       G A A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TTGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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