The detailed information of tRNA gene sequence


Sequence ID>WENV170171300
Genome IDCEOQ01048636
Search identical group
Phylum/Class[CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 485
End posion on genome 412
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gctgtcttcA
tRNA gene sequence 
GGGCACTTAGCTCAGCGGTAGAGCGTAGGATTGCAGATCCCGAGGTCACCGGTTCGATTC
CGGTAGTGCCCTTgt
Downstream region at tRNA end position 
tctgtttttt
Secondary structure (Cloverleaf model)
>WENV170171300	Cys	GCA
                   A      TTgt tctgtttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     T - A          T T
                    T     T G G C C     A
        G A        A      | | | | |     G
      C     C T C G       A C C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    T + G
                    A   C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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