The detailed information of tRNA gene sequence


Sequence ID>WENV170171352
Genome IDCEOQ01050728
Search identical group
Phylum/Class[CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1248
End posion on genome 1320
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcgtaccctt
tRNA gene sequence 
TCCTGGTTGGTGTAGTTGGTAACATTTCTGCCTGTCACGCAGAAGCCCGGGGTTCGATTC
CCCGGCTAGGAACtt
Downstream region at tRNA end position 
tttggtcagg
Secondary structure (Cloverleaf model)
>WENV170171352	Asp	GTC
                   t      ACtt tttggtcagg
                     T - A
                     C - G
                     C - G
                     T - A
                     G + T
                     G - C
                     T + G          T T
                    T     G C C C C     A
      T G A        G      | | | | |     G
    T       T G T G       C G G G G     C
    G       | | | +                 T T
    G       A C A T
      T A          T     AGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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