The detailed information of tRNA gene sequence


Sequence ID>WENV170171439
Genome IDCEOQ01056421
Search identical group
Phylum/Class[CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 235
End posion on genome 325
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctgccggcac
tRNA gene sequence 
GGAGAGGTGGCTGAGTTGGTTTAAGGTACACGCTTGGAAAGCGTGCGTAGGCTAAAACCT
ACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttgttttat
Secondary structure (Cloverleaf model)
>WENV170171439	Ser	GGA
                   c      GCCA tttgttttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           + | +                 T T
  T         A G G T
    T T A          A     CGTAGGCTAAAACCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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