The detailed information of tRNA gene sequence


Sequence ID>WENV170172184
Genome IDCEOQ01100192
Search identical group
Phylum/Class[CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 198
End posion on genome 124
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtagcaatag
tRNA gene sequence 
GGGCTTGTAGTTCAGACTGGTAGAATACTCGCCTTGCACGCGAGGGGTCCTGGGTTCAAA
TCCCAGCGAGTCCACtt
Downstream region at tRNA end position 
aattttctat
Secondary structure (Cloverleaf model)
>WENV170172184	Ala	TGC
                   g      ACtt aattttctat
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T + G
                     G - C          T A
                    T     G A C C C     A
      A G A        A      | | | | |     A
    C       C T T G       C T G G G     C
    T       | | | +                 T T
    G       G A A T
      G T A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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