The detailed information of tRNA gene sequence


Sequence ID>WENV170172338
Genome IDCEOQ01109990
Search identical group
Phylum/Class[CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1
End posion on genome 90
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAGGCGCACGCCTGGAAAGCGTGATTACTTGAAAGGGTA
ACGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttttttagg
Secondary structure (Cloverleaf model)
>WENV170172338	Ser	GGA
                   n      GCCA tttttttagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     ATTACTTGAAAGGGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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