The detailed information of tRNA gene sequence


Sequence ID>WENV170173028
Genome IDCEOQ01171800
Search identical group
Phylum/Class[CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 800
End posion on genome 878
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaatcatctT
tRNA gene sequence 
GGATCCGTAGTCTAGCTTGGTTTGGATGTTGCACTCACACTGCAGAGGTCAGGGGTTCAA
ATCCCCTCGGATCCATCA
Downstream region at tRNA end position 
ttcctaatta
Secondary structure (Cloverleaf model)
>WENV170173028	Val	CAC
                   T      ATCA ttcctaatta
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
    T C G A        A      | | | | |     A
  T         T C T G       A G G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AGGTC
                    T + G
                    T - A
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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