The detailed information of tRNA gene sequence


Sequence ID>WENV170174055
Genome IDCEOQ01265322
Search identical group
Phylum/Class[CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5927
End posion on genome 5851
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aataattgct
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCACAGGACTCATAAGCCTGGGGTCGGCGGTTCGAC
TCCGCCCCCCGCTACCA
Downstream region at tRNA end position 
tggataaaaa
Secondary structure (Cloverleaf model)
>WENV170174055	Met	CAT
                   t      ACCA tggataaaaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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