The detailed information of tRNA gene sequence


Sequence ID>WENV170175028
Genome IDCEOQ01431727
Search identical group
Phylum/Class[CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 566
End posion on genome 642
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aatttgattt
tRNA gene sequence 
CGGGGTATAGCGCAGTCTGGTAGCGCATCTGCTTTGGGAGCAGGGTGTCGGGGGTTCAAA
TCCCTCTACCCCGACCA
Downstream region at tRNA end position 
tttgcgcctg
Secondary structure (Cloverleaf model)
>WENV170175028	Pro	TGG
                   t      ACCA tttgcgcctg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    C       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GTGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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