The detailed information of tRNA gene sequence


Sequence ID>WENV170177045
Genome IDCEOS01158876
Search identical group
Phylum/Class[CEOS] marine metagenome genome assembly TARA_056_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 177
End posion on genome 247
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctctgtatta
tRNA gene sequence 
AAGAGTGTAGTTTAATGGTAAAATAAGAAGCTTCAACCTTCTCTTTCATGGTTCAAGTCC
GTGTACTCTTGtaa
Downstream region at tRNA end position 
taaaacggat
Secondary structure (Cloverleaf model)
>WENV170177045	SeC	TCA
                   a      Gtaa taaaacggat
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A
                     G + T          T G
                    T     G T G C C     A
        A A        A      | | + | |     A
      T     T T T G       C A T G G     C
      G     | | | +                 T T
      G     A A A T
        T A        A     CTTT
                    A - T
                    G - C
                    A - T
                    A - T
                    G - C
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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