The detailed information of tRNA gene sequence


Sequence ID>WENV170177070
Genome IDCEOS01169520
Search identical group
Phylum/Class[CEOS] marine metagenome genome assembly TARA_056_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 557
End posion on genome 461
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
nnnnnncaga
tRNA gene sequence 
GGGGGCGGAGGGGGACTGGTGTCTCCGGCGGTCTTCAAAACCGTGCGGCCCGGCTAGAAC
CCGGGTAGGTGGGTTCGATTCCCACACGTCCCCGCCA
Downstream region at tRNA end position 
cggcttcggc
Secondary structure (Cloverleaf model)
>WENV170177070	SeC(p)	TCA
                   a      GCCA cggcttcggc
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C A        G      | | | | |     G
    G       G G G G       G T G G G     C
    G       | + | |                 T T
    T       C T C C
      G T          G     GCGGCCCGGCTAGAACCCGGGTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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