The detailed information of tRNA gene sequence


Sequence ID>WENV170177532
Genome IDCEOU01027085
Search identical group
Phylum/Class[CEOU] marine metagenome genome assembly TARA_065_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1475
End posion on genome 1400
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnntaaataa
tRNA gene sequence 
GGGGCTGTAGCTCAGATGGAAGAGCGTCTGATTTGCATTCAGAAGGTCGTCGGTTCGATC
CCGATCAGCTCCACAA
Downstream region at tRNA end position 
ttaaaaactt
Secondary structure (Cloverleaf model)
>WENV170177532	Ala	TGC
                   a      ACAA ttaaaaactt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T A G C C     A
      A G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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