The detailed information of tRNA gene sequence


Sequence ID>WENV170180583
Genome IDCEOW01111468
Search identical group
Phylum/Class[CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 727
End posion on genome 656
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taaaaagtaa
tRNA gene sequence 
GGGGTTGTAGTTCAATGGTAGAATATTGGTTTGTCAGGCCAAATGTTGTGGGTTCGAGTC
CCATCAATCCCGttt
Downstream region at tRNA end position 
gagatgtagg
Secondary structure (Cloverleaf model)
>WENV170180583	Asp	GTC
                   a      Gttt gagatgtagg
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     T - A
                     G - C          T G
                    T     T A C C C     A
        A A        A      + | | | |     G
      T     C T T G       G T G G G     C
      G     | | | +                 T T
      G     G A A T
        T A        A     ATGTT
                    T - A
                    T - A
                    G - C
                    G - C
                    T + G
                  T       G
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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