The detailed information of tRNA gene sequence


Sequence ID>WENV170181141
Genome IDCEOW01215169
Search identical group
Phylum/Class[CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 162
End posion on genome 257
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ataaaataga
tRNA gene sequence 
GCACCCGTAGCTCAGTGGTTAGAGCAGCAAGCTTATACCTTGTATTAGCGCCTGATTAGC
GCGAGGTCGTGGGTTCAAATCCCACCGGGTGTACCA
Downstream region at tRNA end position 
taccggagag
Secondary structure (Cloverleaf model)
>WENV170181141	Ile	TAT
                   a      ACCA taccggagag
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     ATTAGCGCCTGATTAGCGCGAGGTC
                    G + T
                    C - G
                    A - T
                    A - T
                    G - C
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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