The detailed information of tRNA gene sequence


Sequence ID>WENV170181154
Genome IDCEOW01222425
Search identical group
Phylum/Class[CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 126
End posion on genome 50
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attacagtta
tRNA gene sequence 
GGGCTCTTAGCTCAATAGGTTAGAGCGCCGGTCTCATAAACCGTCGGTTGCGAGTTCGAG
TCTCGCAGGGCCCACCA
Downstream region at tRNA end position 
atcatctctc
Secondary structure (Cloverleaf model)
>WENV170181154	Met	CAT
                   a      ACCA atcatctctc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T G
                    T     C G C T C     A
      T A A        A      | | | | |     G
    A       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     CGGTT
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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