The detailed information of tRNA gene sequence


Sequence ID>WENV170182256
Genome IDCEOX01127618
Search identical group
Phylum/Class[CEOX] marine metagenome genome assembly TARA_065_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 288
End posion on genome 362
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaataaacc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGTAGAAGACTCATAATCTTTTGGTCGCTGGTTCGAG
CCCAGCTGGGCCCACat
Downstream region at tRNA end position 
aaaaagcctg
Secondary structure (Cloverleaf model)
>WENV170182256	Met	CAT
                   c      ACat aaaaagcctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     TGGTC
                    G + T
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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