The detailed information of tRNA gene sequence


Sequence ID>WENV170183251
Genome IDCEOY01077808
Search identical group
Phylum/Class[CEOY] marine metagenome genome assembly TARA_056_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1170
End posion on genome 1243
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtttattttA
tRNA gene sequence 
GGTTATATAGCATAATTGGTAGTGCATAAGTTTGCAAAACTTATTGAGGTGGTTCAAATC
CACCTATAGCCTTga
Downstream region at tRNA end position 
aagctttctt
Secondary structure (Cloverleaf model)
>WENV170183251	Cys	GCA
                   A      TTga aagctttctt
                     G - C
                     G - C
                     T + G
                     T - A
                     A - T
                     T - A
                     A - T          T A
                    T     C C A C C     A
      T A A        A      | | | | |     A
    T       T A C G       G G T G G     C
    G       + | | |                 T T
    G       G T G C
      T A          A     TTGA
                    T - A
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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