The detailed information of tRNA gene sequence


Sequence ID>WENV170186289
Genome IDCEPA01032052
Search identical group
Phylum/Class[CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2205
End posion on genome 2112
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
gcaggccaaa
tRNA gene sequence 
GGTCCTATAGTTTAACGGTAAAACACCCGATTTATATTCGGCATAGTCTCCAGATTAGAG
AGCGATCCTGGTTCGAATCCAGGTGGGACCACCA
Downstream region at tRNA end position 
atttttttcc
Secondary structure (Cloverleaf model)
>WENV170186289	Ile	TAT
                   a      ACCA atttttttcc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     G G A C C     A
        A A        A      | | | | |     G
      C     T T T G       C C T G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     ATAGTCTCCAGATTAGAGAGCGAT
                    C   C
                    C - G
                    C - G
                    G - C
                    A - T
                  T       T
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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