The detailed information of tRNA gene sequence


Sequence ID>WENV170187223
Genome IDCEPA01136446
Search identical group
Phylum/Class[CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 311
End posion on genome 226
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cacgggttag
tRNA gene sequence 
GCCGAGATCGCATAGCCTGGTAGTGCGCGCGACTGGAAATCGCGTGGGATCTTCCCTCGG
GGGTTCAAATCCCTCTCTCGGCGCCA
Downstream region at tRNA end position 
taaaccaatc
Secondary structure (Cloverleaf model)
>WENV170187223	Ser	GGA
                   g      GCCA taaaccaatc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T A C G       G G G G G     C
    T       + | | |                 T T
    G       G T G C
      G T A        G     TGGGATCTTCCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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