The detailed information of tRNA gene sequence


Sequence ID>WENV170187433
Genome IDCEPA01161185
Search identical group
Phylum/Class[CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 401
End posion on genome 305
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ccggccccct
tRNA gene sequence 
TGGGGGGTGGCGAAATTGGTAGACGCGCCGTCCTGTTTCGATGGTGATGATAACGTGAAA
ACGCATCTTGTAGGTTCGAACCCTACCCCTCCAGCCA
Downstream region at tRNA end position 
ttttatttgt
Secondary structure (Cloverleaf model)
>WENV170187433	Asn	GTT
                   t      GCCA ttttatttgt
                     T - A
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G - C          C A
                    T     C A T C C     A
      T A A        G      | | | | |     G
    T       A G C G       G T A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGATGATAACGTGAAAACGCATCTT
                    C - G
                    C - G
                    G + T
                    T - A
                    C - G
                  C       C
                  T       T
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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