The detailed information of tRNA gene sequence


Sequence ID>WENV170187743
Genome IDCEPA01240024
Search identical group
Phylum/Class[CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 122
End posion on genome 26
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
actaatctaa
tRNA gene sequence 
GGAAGAGAAACGTTTCCCGGTGGGGCGTCTGGACTTCAAATCCAGGGAGGGTGGTTAGGC
CATTCTCGGTAGGTTCGACTCCTATTCTCTTCCGCCA
Downstream region at tRNA end position 
aaatttctta
Secondary structure (Cloverleaf model)
>WENV170187743	SeC(p)	TCA
                   a      GCCA aaatttctta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     T A T C C     A
      C C T        A      + | | | |     G
    C       T T G C       G T A G G     C
    G       + + | |                 T T
    G       G G C G
      T G G        T     GGAGGGTGGTTAGGCCATTCTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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