The detailed information of tRNA gene sequence


Sequence ID>WENV170187825
Genome IDCEPA01283790
Search identical group
Phylum/Class[CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 174
End posion on genome 263
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gagtttttcc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGCTCGCTTGGAAAGCGTGTAAGGTGTAAAAGCCT
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttcactcgtc
Secondary structure (Cloverleaf model)
>WENV170187825	Ser	GGA
                   c      GCCA ttcactcgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TAAGGTGTAAAAGCCTTC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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