The detailed information of tRNA gene sequence


Sequence ID>WENV170187898
Genome IDCEPA01310354
Search identical group
Phylum/Class[CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3911
End posion on genome 3836
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttaaaataa
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGTACGGGTCTCCAAAACCCGGGGTTGAGGGTTCAAGT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
aaagctaaca
Secondary structure (Cloverleaf model)
>WENV170187898	Trp	CCA
                   a      GCCA aaagctaaca
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | | | | |     A
    T       C T C G       G A G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     GGGTT
                    C - G
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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