The detailed information of tRNA gene sequence


Sequence ID>WENV170188803
Genome IDCEPB01084957
Search identical group
Phylum/Class[CEPB] marine metagenome genome assembly TARA_057_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 269
End posion on genome 178
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcaaaataaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGACGGTTTGCTAAACCGTTATAGGTGGTAACATC
TATCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
tttctaatca
Secondary structure (Cloverleaf model)
>WENV170188803	Ser	GCT
                   a      GCCA tttctaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGTGGTAACATCTATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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