The detailed information of tRNA gene sequence


Sequence ID>WENV170193469
Genome IDCEPH01085439
Search identical group
Phylum/Class[CEPH] marine metagenome genome assembly TARA_048_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 818
End posion on genome 743
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
atataaaaac
tRNA gene sequence 
GCCGGCATAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGTAGGTCCGCGGTTCGAGT
CCGTGTGCCGGCACCA
Downstream region at tRNA end position 
ttaaaagaaa
Secondary structure (Cloverleaf model)
>WENV170193469	Thr	TGT
                   c      ACCA ttaaaagaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     G T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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