The detailed information of tRNA gene sequence


Sequence ID>WENV170193491
Genome IDCEPH01086732
Search identical group
Phylum/Class[CEPH] marine metagenome genome assembly TARA_048_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3943
End posion on genome 4032
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acggatgcct
tRNA gene sequence 
GGAGACGTCGCATAGTCAGGCCTAGTGCACCACCCTGCTAAGGTGGAGTCCCCTCACGGG
GACCGAGGGTTCAAATCCCTCCGTCTCCGCtc
Downstream region at tRNA end position 
aggtgggctc
Secondary structure (Cloverleaf model)
>WENV170193491	Ser	GCT
                   t      GCtc aggtgggctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  A         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        A     AGTCCCCTCACGGGGACC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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