The detailed information of tRNA gene sequence


Sequence ID>WENV170194929
Genome IDCEPJ01083662
Search identical group
Phylum/Class[CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1668
End posion on genome 1592
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagttttgt
tRNA gene sequence 
GCCAGGGTAGCTCAGCTGGTTAGAGCGTCGGACTCATAACCCGAAGGTCGGCGGTTCAAG
TCCGCCCTCTGGTACCA
Downstream region at tRNA end position 
aatatccctt
Secondary structure (Cloverleaf model)
>WENV170194929	Met	CAT
                   t      ACCA aatatccctt
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T
                     G - C          T G
                    T     C C G C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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