The detailed information of tRNA gene sequence


Sequence ID>WENV170195682
Genome IDCEPJ01219614
Search identical group
Phylum/Class[CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 138
End posion on genome 43
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
taagaggtat
tRNA gene sequence 
GGAAGAGAATCGTACCCCGGTGGGGCGCCCGGACTTCAAATCCGGTGAGAGGCGTAAGAC
GTCTCTGGTGGGTTCGACTCCCACTCTTTTCCGCCA
Downstream region at tRNA end position 
aacagacgca
Secondary structure (Cloverleaf model)
>WENV170195682	SeC(p)	TCA
                   t      GCCA aacagacgca
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    C       A T G C       G T G G G     C
    G         + | |                 T T
    G       G G C G
      T G G        C     TGAGAGGCGTAAGACGTCTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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