The detailed information of tRNA gene sequence


Sequence ID>WENV170195784
Genome IDCEPJ01272901
Search identical group
Phylum/Class[CEPJ] marine metagenome genome assembly TARA_048_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 969
End posion on genome 895
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atagttcttT
tRNA gene sequence 
TGCAAAGAAGAGCAACAAGGTAGTTCATCTGTTTCATCTGCAGAAGGTAATGGTTCAAAT
CCATTCTTTGCAAAat
Downstream region at tRNA end position 
ttgatgtcaa
Secondary structure (Cloverleaf model)
>WENV170195784	Met	CAT
                   T      AAat ttgatgtcaa
                     T - A
                     G - C
                     C - G
                     A - T
                     A - T
                     A - T
                     G - C          T A
                    A     T T A C C     A
      C A A        A      | | | | |     A
    A       C G A G       A A T G G     C
    A       | + | |                 T T
    G       G T T C
      G T A        A     AGGT
                    T - A
                    C - G
                    T - A
                    G - C
                    T + G
                  T       T
                  T       C
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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