The detailed information of tRNA gene sequence


Sequence ID>WENV170196287
Genome IDCEPK01035341
Search identical group
Phylum/Class[CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 105774
End posion on genome 105703
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aactcatcta
tRNA gene sequence 
GGCCGCGTAGCTCAGGGGTAGAGCGACGCTCTCATAAGGCGTATGTCGGTGGTTCGAATC
CACCCGCGGCTAaat
Downstream region at tRNA end position 
taaccaatag
Secondary structure (Cloverleaf model)
>WENV170196287	Met	CAT
                   a      Aaat taaccaatag
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     C C A C C     A
        G A        A      | | | | |     G
      G     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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