The detailed information of tRNA gene sequence


Sequence ID>WENV170197082
Genome IDCEPK01099473
Search identical group
Phylum/Class[CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 262
End posion on genome 168
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaaaattaac
tRNA gene sequence 
GGAAGTGGATGCATCCCGGTGGATGTCTCGGTCTTCAAAACCGATGAGTGACCTTAACGG
GCATTGTTGGGTTCGACTCCCAAACATTTCCGCCA
Downstream region at tRNA end position 
tttaaataaa
Secondary structure (Cloverleaf model)
>WENV170197082	SeC(p)	TCA
                   c      GCCA tttaaataaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     T - A
                     G - C
                     G   A          T C
                    A     A A C C C     A
      C C C        T      | | | | |     G
    G       T A C G       T T G G G     C
    G       | | | +                 T T
    T       A T G T
      G G          C     TGAGTGACCTTAACGGGCATTG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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