The detailed information of tRNA gene sequence


Sequence ID>WENV170198230
Genome IDCEPK01296602
Search identical group
Phylum/Class[CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 266
End posion on genome 195
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atattttgta
tRNA gene sequence 
AGCAGTGTGGCGCAGGGGAAGCGCGTAGGGCTCATAACTCTAAGGTCGTAGGATCGAAAC
CTACCACTGCTAtat
Downstream region at tRNA end position 
tttttcaata
Secondary structure (Cloverleaf model)
>WENV170198230	Met	CAT
                   a      Atat tttttcaata
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C          A A
                    T     C A T C C     A
        G A        G      | | | | |     G
      G     C G C G       G T A G G     C
      G     | | | |                 A T
      G     G C G C
        A A        G     AGGTC
                    T - A
                    A - T
                    G - C
                    G + T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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