The detailed information of tRNA gene sequence


Sequence ID>WENV170198274
Genome IDCEPK01312781
Search identical group
Phylum/Class[CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 629
End posion on genome 554
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcaaattaa
tRNA gene sequence 
AGGCCCGTAGTTCAATGGTTAGAACCGTCGGCTCATAACCGATATGTTGGGGGTTCGAGT
CCCTCCGGGCCTACCA
Downstream region at tRNA end position 
gtattattat
Secondary structure (Cloverleaf model)
>WENV170198274	Met	CAT
                   a      ACCA gtattattat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       C T T G       G G G G G     C
    G       | | | |                 T T
    T       G A A C
      T A          C     ATGTT
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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