The detailed information of tRNA gene sequence


Sequence ID>WENV170199470
Genome IDCEPL01120919
Search identical group
Phylum/Class[CEPL] marine metagenome genome assembly TARA_045_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 958
End posion on genome 1045
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgatacctca
tRNA gene sequence 
GGAGAGGTGTCAGAGTGGTCTATTGTGCTACCTTGGAAAGGTAGTGTTGAGTAAAATCAA
CCGTGGGTTCGAATCCCTCCCTCTCCGCat
Downstream region at tRNA end position 
gatttagttt
Secondary structure (Cloverleaf model)
>WENV170199470	Ser	GGA
                   a      GCat gatttagttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      |   | | |     G
    G       G A C T       G T G G G     C
    G       + | |                   T T
    T       T T G T
      C T A        G     TGTTGAGTAAAATCAACC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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