The detailed information of tRNA gene sequence


Sequence ID>WENV170199581
Genome IDCEPL01130770
Search identical group
Phylum/Class[CEPL] marine metagenome genome assembly TARA_045_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 563
End posion on genome 491
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttgtaataaa
tRNA gene sequence 
GAGAAAGTAGCTCAGTGGTTAGAGTGTTAGCCTGTCACGCTAAATGTCGCGGGTTCAAAT
CCCGTCTTTCTCGtgt
Downstream region at tRNA end position 
tttttcgaat
Secondary structure (Cloverleaf model)
>WENV170199581	Asp	GTC
                   a      Gtgt tttttcgaat
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     A
    G       C T C G       G C G G G     C
    G       | | | +                 T T
    T       G A G T
      T A          G     ATGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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