The detailed information of tRNA gene sequence


Sequence ID>WENV170200174
Genome IDCEPM01032029
Search identical group
Phylum/Class[CEPM] marine metagenome genome assembly TARA_038_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 198
End posion on genome 271
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tattataaat
tRNA gene sequence 
GGGGCTTTAGCTCAGTAGGGAGAGCGCTTCCTTTGCACGGAAGAGGTCATCGGTTCGATT
CCGGTAAGCTCCACtg
Downstream region at tRNA end position 
taatatagga
Secondary structure (Cloverleaf model)
>WENV170200174	Ala	TGC
                   t      ACtg taatatagga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     T - A          T T
                    T     T G G C C     A
      T G A        A      | + | | |     G
    A       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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