The detailed information of tRNA gene sequence


Sequence ID>WENV170200461
Genome IDCEPN01027695
Search identical group
Phylum/Class[CEPN] marine metagenome genome assembly TARA_038_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 509
End posion on genome 432
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnat
tRNA gene sequence 
AGCGGGATGGAGCAGTTTGGTCAGCTCGCTGGGCTCATAACCCAGAGGTCGATGGTTCAA
ATCCATCTCCCGCAACTA
Downstream region at tRNA end position 
tgtcacaaat
Secondary structure (Cloverleaf model)
>WENV170200461	Met	CAT
                   t      ACTA tgtcacaaat
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T A C C     A
    T T G A        G      | | | | |     A
  T         C G A G       G A T G G     C
  G         | | | |                 T T
  G         G C T C
    T C A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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