The detailed information of tRNA gene sequence


Sequence ID>WENV170200751
Genome IDCEPO01015440
Search identical group
Phylum/Class[CEPO] marine metagenome genome assembly TARA_041_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5242
End posion on genome 5317
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccttcggcct
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGGGAGTTCGAGT
CTCTCTGCCCCTGCCA
Downstream region at tRNA end position 
ggccaaaaac
Secondary structure (Cloverleaf model)
>WENV170200751	Trp	CCA
                   t      GCCA ggccaaaaac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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